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LOC18782207 WRKY transcription factor 1 [ Prunus persica (peach) ]

Gene ID: 18782207, updated on 9-Nov-2023

Summary

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Gene symbol
LOC18782207
Gene description
WRKY transcription factor 1
Locus tag
PRUPE_3G202000
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus persica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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See LOC18782207 in Genome Data Viewer
Location:
chromosome: G3
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Prunus_persica_NCBIv2 (GCF_000346465.2) G3 NC_034011.1 (21025307..21029388, complement)

Chromosome G3 - NC_034011.1Genomic Context describing neighboring genes Neighboring gene glucan endo-1,3-beta-glucosidase 4 Neighboring gene scarecrow-like transcription factor PAT1 Neighboring gene protein DGCR14 Neighboring gene probable serine/threonine-protein kinase WNK11

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034011.1 Chromosome G3 Reference Prunus_persica_NCBIv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WRKY transcription factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus persica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prunus_persica_NCBIv2 Primary Assembly

Genomic

  1. NC_034011.1 Reference Prunus_persica_NCBIv2 Primary Assembly

    Range
    21025307..21029388 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020558899.1 → XP_020414488.1  WRKY transcription factor 1

    UniProtKB/TrEMBL
    A0A251Q344, M5X4P5
    Conserved Domains (1) summary
    pfam03106
    Location:284 → 339
    WRKY; WRKY DNA -binding domain

  2. XM_020558900.1 → XP_020414489.1  WRKY transcription factor 1

    UniProtKB/TrEMBL
    A0A251Q344, M5X4P5
    Conserved Domains (1) summary
    pfam03106
    Location:284 → 339
    WRKY; WRKY DNA -binding domain

  3. XM_020558901.1 → XP_020414490.1  WRKY transcription factor 1

    UniProtKB/TrEMBL
    A0A251Q344, M5X4P5
    Conserved Domains (1) summary
    pfam03106
    Location:284 → 339
    WRKY; WRKY DNA -binding domain

  4. XM_007215222.2 → XP_007215284.1  WRKY transcription factor 1

    See identical proteins and their annotated locations for XP_007215284.1

    UniProtKB/TrEMBL
    A0A251Q344, M5X4P5
    Conserved Domains (1) summary
    pfam03106
    Location:284 → 339
    WRKY; WRKY DNA -binding domain
Nucleotide Protein Strain
Heading Accession and Version

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