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LOC18776686 probable WRKY transcription factor 61 [ Prunus persica (peach) ]

Gene ID: 18776686, updated on 9-Nov-2023

Summary

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Gene symbol
LOC18776686
Gene description
probable WRKY transcription factor 61
Locus tag
PRUPE_5G187800
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus persica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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See LOC18776686 in Genome Data Viewer
Location:
chromosome: G5
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Prunus_persica_NCBIv2 (GCF_000346465.2) G5 NC_034013.1 (15486864..15490644)

Chromosome G5 - NC_034013.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC18776261 Neighboring gene delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial Neighboring gene uncharacterized LOC109949128 Neighboring gene ubiquitin-conjugating enzyme E2 2 Neighboring gene ubiquitin-conjugating enzyme E2 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034013.1 Chromosome G5 Reference Prunus_persica_NCBIv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable WRKY transcription factor 61

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus persica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prunus_persica_NCBIv2 Primary Assembly

Genomic

  1. NC_034013.1 Reference Prunus_persica_NCBIv2 Primary Assembly

    Range
    15486864..15490644
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020563357.1 → XP_020418946.1  probable WRKY transcription factor 61

    UniProtKB/TrEMBL
    A0A251PAI1
    Conserved Domains (1) summary
    smart00774
    Location:288 → 345
    WRKY; DNA binding domain
Nucleotide Protein Strain
Heading Accession and Version

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