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LOC18776558 transcription factor EGL1 [ Prunus persica (peach) ]

Gene ID: 18776558, updated on 9-Nov-2023

Summary

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Gene symbol
LOC18776558
Gene description
transcription factor EGL1
Locus tag
PRUPE_5G100700
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus persica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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See LOC18776558 in Genome Data Viewer
Location:
chromosome: G5
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Prunus_persica_NCBIv2 (GCF_000346465.2) G5 NC_034013.1 (10865796..10870640)

Chromosome G5 - NC_034013.1Genomic Context describing neighboring genes Neighboring gene tyrosine--tRNA ligase 1, cytoplasmic Neighboring gene uncharacterized LOC18776108 Neighboring gene GMP synthase [glutamine-hydrolyzing] Neighboring gene uncharacterized LOC18776843

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034013.1 Chromosome G5 Reference Prunus_persica_NCBIv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor EGL1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus persica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prunus_persica_NCBIv2 Primary Assembly

Genomic

  1. NC_034013.1 Reference Prunus_persica_NCBIv2 Primary Assembly

    Range
    10865796..10870640
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020564682.1 → XP_020420271.1  transcription factor EGL1

    UniProtKB/TrEMBL
    A0A251P6B0, A0A251P9S8
    Conserved Domains (2) summary
    cd00083
    Location:441 → 492
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    pfam14215
    Location:15 → 198
    bHLH-MYC_N; bHLH-MYC and R2R3-MYB transcription factors N-terminal
Nucleotide Protein Strain
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