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LOC18772322 WRKY transcription factor 44 [ Prunus persica (peach) ]

Gene ID: 18772322, updated on 9-Nov-2023

Summary

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Gene symbol
LOC18772322
Gene description
WRKY transcription factor 44
Locus tag
PRUPE_6G244300
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus persica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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See LOC18772322 in Genome Data Viewer
Location:
chromosome: G6
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Prunus_persica_NCBIv2 (GCF_000346465.2) G6 NC_034014.1 (24197932..24203326)

Chromosome G6 - NC_034014.1Genomic Context describing neighboring genes Neighboring gene two-component response regulator-like APRR7 Neighboring gene zinc finger MYM-type protein 1-like Neighboring gene probable serine/threonine-protein kinase PBL7 Neighboring gene protein NUCLEAR FUSION DEFECTIVE 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034014.1 Chromosome G6 Reference Prunus_persica_NCBIv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WRKY transcription factor 44

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus persica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prunus_persica_NCBIv2 Primary Assembly

Genomic

  1. NC_034014.1 Reference Prunus_persica_NCBIv2 Primary Assembly

    Range
    24197932..24203326
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007205075.2 → XP_007205137.1  WRKY transcription factor 44

    See identical proteins and their annotated locations for XP_007205137.1

    UniProtKB/TrEMBL
    A0A251NV72, M5VZ01
    Conserved Domains (1) summary
    pfam03106
    Location:195 → 249
    WRKY; WRKY DNA -binding domain

  2. XM_020567306.1 → XP_020422895.1  WRKY transcription factor 44

    UniProtKB/TrEMBL
    A0A251NV72, M5VZ01
    Conserved Domains (1) summary
    pfam03106
    Location:195 → 249
    WRKY; WRKY DNA -binding domain

  3. XM_020567307.1 → XP_020422896.1  WRKY transcription factor 44

    UniProtKB/TrEMBL
    A0A251NV72, M5VZ01
    Conserved Domains (1) summary
    pfam03106
    Location:195 → 249
    WRKY; WRKY DNA -binding domain
Nucleotide Protein Strain
Heading Accession and Version

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