U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC18768337 protein FAR1-RELATED SEQUENCE 5 [ Prunus persica (peach) ]

Gene ID: 18768337, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC18768337
Gene description
protein FAR1-RELATED SEQUENCE 5
Locus tag
PRUPE_8G182700
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus persica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC18768337 in Genome Data Viewer
Location:
chromosome: G8
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Prunus_persica_NCBIv2 (GCF_000346465.2) G8 NC_034016.1 (18224375..18228653)

Chromosome G8 - NC_034016.1Genomic Context describing neighboring genes Neighboring gene cellulose synthase-like protein D4 Neighboring gene AT-rich interactive domain-containing protein 3 Neighboring gene protein FAR1-RELATED SEQUENCE 9 Neighboring gene uncharacterized LOC18767679

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_034016.1 Chromosome G8 Reference Prunus_persica_NCBIv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein FAR1-RELATED SEQUENCE 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Prunus persica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prunus_persica_NCBIv2 Primary Assembly

Genomic

  1. NC_034016.1 Reference Prunus_persica_NCBIv2 Primary Assembly

    Range
    18224375..18228653
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020569875.1 → XP_020425464.1  protein FAR1-RELATED SEQUENCE 5

    UniProtKB/TrEMBL
    M5VLX0
    Conserved Domains (1) summary
    cl28060
    Location:60 → 706
    FAR1; FAR1 DNA-binding domain

RNA

  1. XR_002272832.1 RNA Sequence

  2. XR_002272833.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases