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LOC18768024 B-box zinc finger protein 19 [ Prunus persica (peach) ]

Gene ID: 18768024, updated on 9-Nov-2023

Summary

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Gene symbol
LOC18768024
Gene description
B-box zinc finger protein 19
Locus tag
PRUPE_8G085000
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus persica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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See LOC18768024 in Genome Data Viewer
Location:
chromosome: G8
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Prunus_persica_NCBIv2 (GCF_000346465.2) G8 NC_034016.1 (11807940..11811816)

Chromosome G8 - NC_034016.1Genomic Context describing neighboring genes Neighboring gene U3 small nucleolar ribonucleoprotein protein IMP4 Neighboring gene kinesin-like protein KIN-7E Neighboring gene fructose-bisphosphate aldolase 1, chloroplastic Neighboring gene uncharacterized LOC109950563

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034016.1 Chromosome G8 Reference Prunus_persica_NCBIv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in photomorphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
B-box zinc finger protein 18; B-box zinc finger protein 19

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus persica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prunus_persica_NCBIv2 Primary Assembly

Genomic

  1. NC_034016.1 Reference Prunus_persica_NCBIv2 Primary Assembly

    Range
    11807940..11811816
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020569585.1 → XP_020425174.1  B-box zinc finger protein 18 isoform X3

    Conserved Domains (1) summary
    smart00336
    Location:53 → 96
    BBOX; B-Box-type zinc finger

  2. XM_020569584.1 → XP_020425173.1  B-box zinc finger protein 19 isoform X2

    Conserved Domains (1) summary
    smart00336
    Location:53 → 96
    BBOX; B-Box-type zinc finger

  3. XM_007201780.2 → XP_007201842.1  B-box zinc finger protein 18 isoform X1

    See identical proteins and their annotated locations for XP_007201842.1

    UniProtKB/TrEMBL
    M5VQ21
    Conserved Domains (1) summary
    smart00336
    Location:53 → 96
    BBOX; B-Box-type zinc finger
Nucleotide Protein Strain
Heading Accession and Version

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