U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PHAVU_002G141500g hypothetical protein [ Phaseolus vulgaris ]

Gene ID: 18637930, updated on 28-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
PHAVU_002G141500g
Gene description
hypothetical protein
Locus tag
PHAVU_002G141500g
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Phaseolus vulgaris (cultivar: G19833)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_023758.1 (27615787..27618066)

Chromosome 2 - NC_023758.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_023758.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
hypothetical protein
XP_007158304.1
  • encoded by transcript PHAVU_002G1415001m

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_023758.1 Reference assembly

    Range
    27615787..27618066
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007158242.1 → XP_007158304.1  hypothetical protein PHAVU_002G141500g [Phaseolus vulgaris]

    See identical proteins and their annotated locations for XP_007158304.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q41102, V7CLS1
    Conserved Domains (3) summary
    cd00083
    Location:547 → 598
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    pfam05377
    Location:590 → 625
    FlaC_arch; Flagella accessory protein C (FlaC)
    pfam14215
    Location:118 → 299
    bHLH-MYC_N; bHLH-MYC and R2R3-MYB transcription factors N-terminal
Protein Accession Links
GenPept Link UniProtKB Link
ESW30298.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases