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PHAVU_002G039800g hypothetical protein [ Phaseolus vulgaris ]

Gene ID: 18636883, discontinued on 24-Sep-2024
  • This record was discontinued.

Summary

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Gene symbol
PHAVU_002G039800g
Gene description
hypothetical protein
Locus tag
PHAVU_002G039800g
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Phaseolus vulgaris (cultivar: G19833)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Genomic context

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Location:
chromosome: 2
Exon count:
11
Sequence:
Chromosome: 2; NC_023758.1 (3806830..3812706)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023758.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
hypothetical protein
XP_007157058.1
  • encoded by transcript PHAVU_002G0398002m
XP_007157059.1
  • encoded by transcript PHAVU_002G0398003m
XP_007157060.1
  • encoded by transcript PHAVU_002G0398001m
XP_007157061.1
  • encoded by transcript PHAVU_002G0398004m
XP_007157062.1
  • encoded by transcript PHAVU_002G0398005m
XP_007157063.1
  • encoded by transcript PHAVU_002G0398006m

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_023758.1 Reference assembly

    Range
    3806830..3812706
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007156997.1 → XP_007157059.1  hypothetical protein PHAVU_002G039800g [Phaseolus vulgaris]

    Status: PROVISIONAL

    Conserved Domains (3) summary
    cd14458
    Location:177 → 223
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:91 → 172
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:179 → 283
    DP; Transcription factor DP

  2. XM_007156996.1 → XP_007157058.1  hypothetical protein PHAVU_002G039800g [Phaseolus vulgaris]

    Status: PROVISIONAL

    Conserved Domains (3) summary
    cd14458
    Location:177 → 223
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:91 → 172
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    cl07405
    Location:179 → 241
    DP_DD; Dimerization domain of DP

  3. XM_007156998.1 → XP_007157060.1  hypothetical protein PHAVU_002G039800g [Phaseolus vulgaris]

    Status: PROVISIONAL

    Conserved Domains (3) summary
    cd14458
    Location:178 → 224
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:92 → 173
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:180 → 284
    DP; Transcription factor DP

  4. XM_007157000.1 → XP_007157062.1  hypothetical protein PHAVU_002G039800g [Phaseolus vulgaris]

    Status: PROVISIONAL

    Conserved Domains (3) summary
    cd14458
    Location:178 → 224
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:92 → 173
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    cl07405
    Location:180 → 242
    DP_DD; Dimerization domain of DP

  5. XM_007157001.1 → XP_007157063.1  hypothetical protein PHAVU_002G039800g [Phaseolus vulgaris]

    Status: PROVISIONAL

    Conserved Domains (3) summary
    cd14458
    Location:177 → 223
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:91 → 172
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:179 → 283
    DP; Transcription factor DP

  6. XM_007156999.1 → XP_007157061.1  hypothetical protein PHAVU_002G039800g [Phaseolus vulgaris]

    Status: PROVISIONAL

    Conserved Domains (3) summary
    cd14458
    Location:177 → 223
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:91 → 172
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    cl07405
    Location:179 → 241
    DP_DD; Dimerization domain of DP
Protein Accession Links
GenPept Link UniProtKB Link
ESW29052.1
ESW29053.1
ESW29054.1
ESW29055.1
ESW29056.1
ESW29057.1

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