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LOC18608951 squamosa promoter-binding-like protein 16 [ Theobroma cacao (cacao) ]

Gene ID: 18608951, updated on 9-Nov-2023

Summary

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Gene symbol
LOC18608951
Gene description
squamosa promoter-binding-like protein 16
Gene type
protein coding
RefSeq status
MODEL
Organism
Theobroma cacao
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Genomic context

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Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 2 NC_030851.1 (15687043..15692156)

Chromosome 2 - NC_030851.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC18608948 Neighboring gene uncharacterized LOC18608949 Neighboring gene agamous-like MADS-box protein AGL9 homolog Neighboring gene uncharacterized LOC18608960

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_030851.1 Chromosome 2 Reference Criollo_cocoa_genome_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
squamosa promoter-binding-like protein 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Criollo_cocoa_genome_V2 Primary Assembly

Genomic

  1. NC_030851.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Range
    15687043..15692156
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018115131.1 → XP_017970620.1  squamosa promoter-binding-like protein 16

    UniProtKB/TrEMBL
    A0A061E606

  2. XM_018115132.1 → XP_017970621.1  squamosa promoter-binding-like protein 16

    UniProtKB/TrEMBL
    A0A061E606
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases