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LOC18422350 histone acetyltransferase of the MYST family 1 [ Amborella trichopoda ]

Gene ID: 18422350, updated on 25-Jan-2024

Summary

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Gene symbol
LOC18422350
Gene description
histone acetyltransferase of the MYST family 1
Locus tag
AMTR_s00010p00239130
Gene type
protein coding
RefSeq status
MODEL
Organism
Amborella trichopoda
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella
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Genomic context

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See LOC18422350 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current AMTR1.0 (GCF_000471905.2) Unplaced Scaffold NW_006494904.1 (5451949..5473308, complement)

NW_006494904.1Genomic Context describing neighboring genes Neighboring gene CRS2-associated factor 1, mitochondrial Neighboring gene LRR receptor kinase BAK1 Neighboring gene nuclear transcription factor Y subunit B-3 Neighboring gene UPF0307 protein BP2965

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006494904.1 Unplaced Scaffold Reference AMTR1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone acetyltransferase of the MYST family 1
Names
probable MYST-like histone acetyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Amborella trichopoda Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AMTR1.0 Primary Assembly

Genomic

  1. NW_006494904.1 Reference AMTR1.0 Primary Assembly

    Range
    5451949..5473308 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006827021.3 → XP_006827084.1  histone acetyltransferase of the MYST family 1

    See identical proteins and their annotated locations for XP_006827084.1

    UniProtKB/TrEMBL
    W1NFR6
    Conserved Domains (3) summary
    PLN00104
    Location:13 → 436
    PLN00104; MYST -like histone acetyltransferase; Provisional
    pfam11717
    Location:51 → 109
    Tudor-knot; RNA binding activity-knot of a chromodomain
    cl17182
    Location:148 → 431
    NAT_SF; N-Acyltransferase superfamily: Various enyzmes that characteristicly catalyze the transfer of an acyl group to a substrate
Nucleotide Protein
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