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Oaz1 ornithine decarboxylase antizyme 1 [ Mus musculus (house mouse) ]

Gene ID: 18245, updated on 2-Nov-2024

Summary

Official Symbol
Oaz1provided by MGI
Official Full Name
ornithine decarboxylase antizyme 1provided by MGI
Primary source
MGI:MGI:109433
See related
Ensembl:ENSMUSG00000035242 AllianceGenome:MGI:109433
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AZ1; Oaz; AZ-1; ODC-Az; Antizyme
Summary
The protein encoded by this gene belongs to the ornithine decarboxylase antizyme family, which plays a role in cell growth and proliferation by regulating intracellular polyamine levels. Expression of antizymes requires +1 ribosomal frameshifting, which is enhanced by high levels of polyamines. Antizymes in turn bind to and inhibit ornithine decarboxylase (ODC), the key enzyme in polyamine biosynthesis; thus, completing the auto-regulatory circuit. This gene encodes antizyme 1, the first member of the antizyme family, that has broad tissue distribution, and negatively regulates intracellular polyamine levels by binding to and targeting ODC for degradation, as well as inhibiting polyamine uptake. Antizyme 1 mRNA contains two potential in-frame AUGs; and studies in rat suggest that alternative use of the two translation initiation sites results in N-terminally distinct protein isoforms with different subcellular localization. Alternatively spliced transcript variants have also been noted for this gene. [provided by RefSeq, Dec 2014]
Expression
Ubiquitous expression in adrenal adult (RPKM 386.0), thymus adult (RPKM 368.7) and 28 other tissues See more
Orthologs
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Genomic context

See Oaz1 in Genome Data Viewer
Location:
10 C1; 10 39.72 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (80662490..80665124)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (80826656..80829290)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene Amh promoter region Neighboring gene anti-Mullerian hormone Neighboring gene junctional sarcoplasmic reticulum protein 1 Neighboring gene STARR-seq mESC enhancer starr_27299 Neighboring gene STARR-positive B cell enhancer ABC_E369 Neighboring gene microRNA 1982 Neighboring gene leucine rich repeat and Ig domain containing 3 Neighboring gene STARR-positive B cell enhancer ABC_E11447 Neighboring gene STARR-positive B cell enhancer ABC_E6885 Neighboring gene LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables enzyme binding ISO
Inferred from Sequence Orthology
more info
 
enables ornithine decarboxylase inhibitor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables ornithine decarboxylase inhibitor activity IDA
Inferred from Direct Assay
more info
PubMed 
enables ornithine decarboxylase inhibitor activity IGI
Inferred from Genetic Interaction
more info
 
enables ornithine decarboxylase inhibitor activity ISO
Inferred from Sequence Orthology
more info
 
enables ornithine decarboxylase inhibitor activity TAS
Traceable Author Statement
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein-containing complex binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
ornithine decarboxylase antizyme 1
Names
antizyme 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001301034.1NP_001287963.1  ornithine decarboxylase antizyme 1 isoform 2

    Status: REVIEWED

    Description
    Transcript Variant: This variant (2) uses an alternate, in-frame acceptor splice site at the second exon compared to variant 1. The resulting isoform (2) lacks 2 internal amino acids compared to isoform 1.
    Source sequence(s)
    AA270439, AI838943, AK146571, BY112600
    UniProtKB/TrEMBL
    J3QMV2
    Related
    ENSMUSP00000136469.2, ENSMUST00000177850.8
    Conserved Domains (1) summary
    pfam02100
    Location:128216
    ODC_AZ; Ornithine decarboxylase antizyme
  2. NM_008753.4NP_032779.2  ornithine decarboxylase antizyme 1 isoform 1

    See identical proteins and their annotated locations for NP_032779.2

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1) encodes the longer isoform (1).
    Source sequence(s)
    AI838943, AK146571, BY112600
    Consensus CDS
    CCDS56736.1
    UniProtKB/Swiss-Prot
    O08610, P54369
    UniProtKB/TrEMBL
    J3QMV2
    Related
    ENSMUSP00000137400.2, ENSMUST00000180036.8
    Conserved Domains (1) summary
    pfam02100
    Location:128218
    ODC_AZ; Ornithine decarboxylase antizyme

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    80662490..80665124
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)