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LOC18100303 ethylene-responsive transcription factor ERF017 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 18100303, updated on 23-Nov-2023

Summary

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Gene symbol
LOC18100303
Gene description
ethylene-responsive transcription factor ERF017
Locus tag
POPTR_006G138800v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Also known as
RAP2L11
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Genomic context

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See LOC18100303 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 6 NC_037290.2 (11576654..11577614)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 6 NC_037290.1 (11599630..11600607)

Chromosome 6 - NC_037290.2Genomic Context describing neighboring genes Neighboring gene 20 kDa chaperonin, chloroplastic Neighboring gene ethylene-responsive transcription factor ERF017 Neighboring gene ethylene-responsive transcription factor ERF016 Neighboring gene beta-galactosidase 15

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethylene-responsive transcription factor ERF017
Names
ERF family protein
RAP2-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037290.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    11576654..11577614
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052453581.1 → XP_052309541.1  ethylene-responsive transcription factor ERF017

Nucleotide Protein
Heading Accession and Version

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