U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC18098351 protein FAR1-RELATED SEQUENCE 11 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 18098351, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC18098351
Gene description
protein FAR1-RELATED SEQUENCE 11
Locus tag
POPTR_004G227600v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC18098351 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 4 NC_037288.2 (23092478..23097380, complement)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 4 NC_037288.1 (23269353..23274294, complement)

Chromosome 4 - NC_037288.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC18098347 Neighboring gene uncharacterized LOC18098350 Neighboring gene uncharacterized LOC18098352 Neighboring gene pentatricopeptide repeat-containing protein At1g10270

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein FAR1-RELATED SEQUENCE 11

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037288.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    23092478..23097380 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006385008.3 → XP_006385070.1  protein FAR1-RELATED SEQUENCE 11

    See identical proteins and their annotated locations for XP_006385070.1

    UniProtKB/TrEMBL
    B9N0G8
    Conserved Domains (1) summary
    cl28060
    Location:49 → 648
    FAR1; FAR1 DNA-binding domain

  2. XM_024599904.2 → XP_024455672.1  protein FAR1-RELATED SEQUENCE 11

    UniProtKB/TrEMBL
    B9N0G8
    Conserved Domains (1) summary
    cl28060
    Location:49 → 648
    FAR1; FAR1 DNA-binding domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials