U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC18095445 BES1/BZR1 homolog protein 4 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 18095445, updated on 6-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
LOC18095445
Gene description
BES1/BZR1 homolog protein 4
Locus tag
POPTR_003G026600v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC18095445 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 3 NC_037287.2 (152494..156316, complement)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 3 NC_037287.1 (3197785..3201681, complement)

Chromosome 3 - NC_037287.2Genomic Context describing neighboring genes Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At1g53430 Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At1g53440 Neighboring gene uncharacterized LOC112326984 Neighboring gene uncharacterized LOC112326808 Neighboring gene gamma-glutamyl hydrolase 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding. Ralph SG, et al. BMC Genomics, 2008 Jan 29. PMID 18230180, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in brassinosteroid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
BES1/BZR1 homolog protein 4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037287.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    152494..156316 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006370038.3 → XP_006370100.1  BES1/BZR1 homolog protein 4 isoform X2

    See identical proteins and their annotated locations for XP_006370100.1

    UniProtKB/TrEMBL
    A9PB38
    Conserved Domains (1) summary
    pfam05687
    Location:31 → 104
    BES1_N; BES1/BZR1 plant transcription factor, N-terminal

  2. XM_006370039.3 → XP_006370101.1  BES1/BZR1 homolog protein 4 isoform X1

    See identical proteins and their annotated locations for XP_006370101.1

    UniProtKB/TrEMBL
    A9PB38
    Conserved Domains (1) summary
    pfam05687
    Location:31 → 104
    BES1_N; BES1/BZR1 plant transcription factor, N-terminal

  3. XM_052451049.1 → XP_052307009.1  BES1/BZR1 homolog protein 4 isoform X3

    UniProtKB/TrEMBL
    U7DZC8

  4. XM_024596739.2 → XP_024452507.1  BES1/BZR1 homolog protein 4 isoform X4

    UniProtKB/TrEMBL
    A0A3N7G1F0, U7DZC8
    Conserved Domains (1) summary
    pfam05687
    Location:3 → 56
    BES1_N; BES1/BZR1 plant transcription factor, N-terminal
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.