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LOC18055843 trihelix transcription factor ASIL1 [ Citrus x clementina ]

Gene ID: 18055843, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18055843
Gene description
trihelix transcription factor ASIL1
Locus tag
CICLE_v10008866mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC18055843 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006263303.1 (5561422..5563686)

NW_006263303.1Genomic Context describing neighboring genes Neighboring gene probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 Neighboring gene glycine-rich cell wall structural protein-like Neighboring gene uncharacterized LOC18055844 Neighboring gene ARF guanine-nucleotide exchange factor GNL2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006263303 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trihelix transcription factor ASIL1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006263303.1 Reference Citrus_clementina_v1.0

    Range
    5561422..5563686
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006451043.2 → XP_006451106.1  trihelix transcription factor ASIL1

    See identical proteins and their annotated locations for XP_006451106.1

    UniProtKB/TrEMBL
    V4UPH6
    Conserved Domains (1) summary
    pfam13837
    Location:108 → 190
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
Nucleotide Protein
Heading Accession and Version

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