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LOC18054860 protein indeterminate-domain 7 [ Citrus x clementina ]

Gene ID: 18054860, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18054860
Gene description
protein indeterminate-domain 7
Locus tag
CICLE_v10007837mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC18054860 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006263303.1 (4109876..4112519, complement)

NW_006263303.1Genomic Context describing neighboring genes Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2 Neighboring gene ATP-dependent zinc metalloprotease FTSH 4, mitochondrial Neighboring gene beta-fructofuranosidase, insoluble isoenzyme CWINV1 Neighboring gene probable ADP,ATP carrier protein At5g56450

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006263303 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein indeterminate-domain 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006263303.1 Reference Citrus_clementina_v1.0

    Range
    4109876..4112519 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006450796.2 → XP_006450859.1  protein indeterminate-domain 7 isoform X1

    See identical proteins and their annotated locations for XP_006450859.1

    UniProtKB/TrEMBL
    V4UIM5, V4WCD6
    Conserved Domains (2) summary
    PRK14959
    Location:306 → 363
    PRK14959; DNA polymerase III subunits gamma and tau; Provisional
    sd00017
    Location:161 → 180
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_024178410.1 → XP_024034178.1  protein indeterminate-domain 7 isoform X2

    Conserved Domains (1) summary
    sd00017
    Location:161 → 180
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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