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LOC18054155 protein ATAF2 [ Citrus x clementina ]

Gene ID: 18054155, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18054155
Gene description
protein ATAF2
Locus tag
CICLE_v10010632mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC18054155 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006263303.1 (27435290..27436986, complement)

NW_006263303.1Genomic Context describing neighboring genes Neighboring gene probable xyloglucan endotransglucosylase/hydrolase protein 23 Neighboring gene NAC transcription factor 25 Neighboring gene probable xyloglucan endotransglucosylase/hydrolase protein 23 Neighboring gene probable xyloglucan endotransglucosylase/hydrolase protein 23 Neighboring gene probable xyloglucan endotransglucosylase/hydrolase protein 23

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006263303 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein ATAF2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006263303.1 Reference Citrus_clementina_v1.0

    Range
    27435290..27436986 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006453355.1 → XP_006453418.1  protein ATAF2

    See identical proteins and their annotated locations for XP_006453418.1

    UniProtKB/TrEMBL
    V4U1I4
    Conserved Domains (1) summary
    pfam02365
    Location:64 → 187
    NAM; No apical meristem (NAM) protein
Nucleotide Protein
Heading Accession and Version

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