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LOC18052470 homeobox-leucine zipper protein MERISTEM L1 [ Citrus x clementina ]

Gene ID: 18052470, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18052470
Gene description
homeobox-leucine zipper protein MERISTEM L1
Locus tag
CICLE_v10014424mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC18052470 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262688.1 (32194843..32200321, complement)

NW_006262688.1Genomic Context describing neighboring genes Neighboring gene polyadenylation and cleavage factor homolog 4 Neighboring gene tryptophan synthase beta chain 1 Neighboring gene COBRA-like protein 10 Neighboring gene CRIB domain-containing protein RIC10

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006262688 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox-leucine zipper protein MERISTEM L1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006262688.1 Reference Citrus_clementina_v1.0

    Range
    32194843..32200321 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024191550.1 → XP_024047318.1  homeobox-leucine zipper protein MERISTEM L1

    UniProtKB/TrEMBL
    V4UJ30
    Conserved Domains (3) summary
    cd08875
    Location:239 → 455
    START_ArGLABRA2_like; C-terminal lipid-binding START domain of the Arabidopsis homeobox protein GLABRA 2 and related proteins
    pfam00046
    Location:61 → 114
    Homeobox; Homeobox domain
    cl27820
    Location:40 → 151
    Abdominal-A; Homeobox protein

  2. XM_006449014.2 → XP_006449077.1  homeobox-leucine zipper protein MERISTEM L1

    See identical proteins and their annotated locations for XP_006449077.1

    UniProtKB/TrEMBL
    V4UJ30
    Conserved Domains (3) summary
    cd08875
    Location:239 → 455
    START_ArGLABRA2_like; C-terminal lipid-binding START domain of the Arabidopsis homeobox protein GLABRA 2 and related proteins
    pfam00046
    Location:61 → 114
    Homeobox; Homeobox domain
    cl27820
    Location:40 → 151
    Abdominal-A; Homeobox protein

  3. XM_006449013.2 → XP_006449076.1  homeobox-leucine zipper protein MERISTEM L1

    See identical proteins and their annotated locations for XP_006449076.1

    UniProtKB/TrEMBL
    V4UJ30
    Conserved Domains (3) summary
    cd08875
    Location:239 → 455
    START_ArGLABRA2_like; C-terminal lipid-binding START domain of the Arabidopsis homeobox protein GLABRA 2 and related proteins
    pfam00046
    Location:61 → 114
    Homeobox; Homeobox domain
    cl27820
    Location:40 → 151
    Abdominal-A; Homeobox protein

  4. XM_024191549.1 → XP_024047317.1  homeobox-leucine zipper protein MERISTEM L1

    UniProtKB/TrEMBL
    V4UJ30
    Conserved Domains (3) summary
    cd08875
    Location:239 → 455
    START_ArGLABRA2_like; C-terminal lipid-binding START domain of the Arabidopsis homeobox protein GLABRA 2 and related proteins
    pfam00046
    Location:61 → 114
    Homeobox; Homeobox domain
    cl27820
    Location:40 → 151
    Abdominal-A; Homeobox protein

  5. XM_024191548.1 → XP_024047316.1  homeobox-leucine zipper protein MERISTEM L1

    UniProtKB/TrEMBL
    V4UJ30
    Conserved Domains (3) summary
    cd08875
    Location:239 → 455
    START_ArGLABRA2_like; C-terminal lipid-binding START domain of the Arabidopsis homeobox protein GLABRA 2 and related proteins
    pfam00046
    Location:61 → 114
    Homeobox; Homeobox domain
    cl27820
    Location:40 → 151
    Abdominal-A; Homeobox protein
Nucleotide Protein
Heading Accession and Version

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