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LOC18047493 bZIP transcription factor 53 [ Citrus x clementina ]

Gene ID: 18047493, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18047493
Gene description
bZIP transcription factor 53
Locus tag
CICLE_v10022730mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC18047493 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262339.1 (46447573..46448759)

NW_006262339.1Genomic Context describing neighboring genes Neighboring gene bromodomain and WD repeat-containing protein 1 Neighboring gene DNA replication licensing factor MCM7 Neighboring gene vacuolar protein sorting-associated protein 51 homolog Neighboring gene calvin cycle protein CP12-2, chloroplastic Neighboring gene probable glutamyl endopeptidase, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006262339 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bZIP transcription factor 53

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006262339.1 Reference Citrus_clementina_v1.0

    Range
    46447573..46448759
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006444430.2 → XP_006444493.1  bZIP transcription factor 53

    See identical proteins and their annotated locations for XP_006444493.1

    UniProtKB/TrEMBL
    V4TBQ4
    Conserved Domains (1) summary
    cd14702
    Location:25 → 75
    bZIP_plant_GBF1; Basic leucine zipper (bZIP) domain of Plant G-box binding factor 1 (GBF1)-like transcription factors: a DNA-binding and dimerization domain
Nucleotide Protein
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