U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC18045471 transcription factor bHLH51 [ Citrus x clementina ]

Gene ID: 18045471, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC18045471
Gene description
transcription factor bHLH51
Locus tag
CICLE_v10032356mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC18045471 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262274.1 (1385438..1386399)

NW_006262274.1Genomic Context describing neighboring genes Neighboring gene GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase Neighboring gene uncharacterized LOC18045470 Neighboring gene transcription factor MYB73 Neighboring gene uncharacterized LOC112099233

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006262274 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transcription factor bHLH51

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006262274.1 Reference Citrus_clementina_v1.0

    Range
    1385438..1386399
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006435708.2 → XP_006435771.1  transcription factor bHLH51

    See identical proteins and their annotated locations for XP_006435771.1

    UniProtKB/TrEMBL
    V4TH02
    Conserved Domains (2) summary
    cd04873
    Location:183 → 247
    ACT_UUR-ACR-like; ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD
    pfam00010
    Location:83 → 130
    HLH; Helix-loop-helix DNA-binding domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases