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LOC18043989 uncharacterized LOC18043989 [ Citrus x clementina ]

Gene ID: 18043989, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18043989
Gene description
uncharacterized LOC18043989
Locus tag
CICLE_v10031100mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC18043989 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262274.1 (17428448..17435242)

NW_006262274.1Genomic Context describing neighboring genes Neighboring gene protein SCAI Neighboring gene uncharacterized LOC18043988 Neighboring gene NAC domain-containing protein 90 Neighboring gene uncharacterized LOC112099151

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006262274 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC18043989

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006262274.1 Reference Citrus_clementina_v1.0

    Range
    17428448..17435242
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006437308.2 → XP_006437371.1  uncharacterized protein LOC18043989 isoform X1

    See identical proteins and their annotated locations for XP_006437371.1

    UniProtKB/TrEMBL
    V4TLA9
    Conserved Domains (2) summary
    pfam02365
    Location:403 → 443
    NAM; No apical meristem (NAM) protein
    cl21472
    Location:26 → 138
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...

  2. XM_024186687.1 → XP_024042455.1  uncharacterized protein LOC18043989 isoform X2

    Conserved Domains (1) summary
    cl21472
    Location:26 → 138
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...

  3. XM_024186689.1 → XP_024042457.1  uncharacterized protein LOC18043989 isoform X4

  4. XM_024186688.1 → XP_024042456.1  uncharacterized protein LOC18043989 isoform X3

Nucleotide Protein
Heading Accession and Version

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