U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC18043674 transcription factor TCP12 [ Citrus x clementina ]

Gene ID: 18043674, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC18043674
Gene description
transcription factor TCP12
Locus tag
CICLE_v10033382mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC18043674 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262274.1 (19744366..19745775)

NW_006262274.1Genomic Context describing neighboring genes Neighboring gene transcription factor bHLH30 Neighboring gene aspartyl protease family protein 2 Neighboring gene coiled-coil domain-containing protein 130 Neighboring gene CLAVATA3/ESR (CLE)-related protein 12

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006262274 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of secondary shoot formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transcription factor TCP12

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006262274.1 Reference Citrus_clementina_v1.0

    Range
    19744366..19745775
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006437681.1 → XP_006437744.1  transcription factor TCP12

    See identical proteins and their annotated locations for XP_006437744.1

    UniProtKB/TrEMBL
    V4VET5
    Conserved Domains (1) summary
    pfam03634
    Location:123 → 270
    TCP; TCP family transcription factor
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases