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LOC18043024 myb family transcription factor PHL11 [ Citrus x clementina ]

Gene ID: 18043024, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18043024
Gene description
myb family transcription factor PHL11
Locus tag
CICLE_v10002089mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC18043024 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262201.1 (25793011..25795678, complement)

NW_006262201.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene isoflavone reductase homolog Neighboring gene uncharacterized GTP-binding protein YjiA Neighboring gene DNA (cytosine-5)-methyltransferase CMT2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006262201 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myb family transcription factor PHL11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006262201.1 Reference Citrus_clementina_v1.0

    Range
    25793011..25795678 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006432567.2 → XP_006432630.1  myb family transcription factor PHL11 isoform X2

    See identical proteins and their annotated locations for XP_006432630.1

    UniProtKB/TrEMBL
    V4T3A2
    Conserved Domains (2) summary
    TIGR01557
    Location:22 → 77
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    pfam14379
    Location:120 → 164
    Myb_CC_LHEQLE; MYB-CC type transfactor, LHEQLE motif

  2. XM_006432568.2 → XP_006432631.1  myb family transcription factor PHL11 isoform X1

    See identical proteins and their annotated locations for XP_006432631.1

    UniProtKB/TrEMBL
    V4T8I9
    Conserved Domains (2) summary
    TIGR01557
    Location:22 → 78
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    pfam14379
    Location:121 → 165
    Myb_CC_LHEQLE; MYB-CC type transfactor, LHEQLE motif
Nucleotide Protein
Heading Accession and Version

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