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LOC18041001 NAC transcription factor 29 [ Citrus x clementina ]

Gene ID: 18041001, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18041001
Gene description
NAC transcription factor 29
Locus tag
CICLE_v10001389mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC18041001 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262201.1 (40817846..40821717, complement)

NW_006262201.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112098216 Neighboring gene uncharacterized LOC18040696 Neighboring gene methyltransferase-like protein 2 Neighboring gene protein BRASSINAZOLE-RESISTANT 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006262201 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NAC domain-containing protein 100; NAC transcription factor 29

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006262201.1 Reference Citrus_clementina_v1.0

    Range
    40817846..40821717 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006434870.2 → XP_006434933.1  NAC transcription factor 29 isoform X2

    See identical proteins and their annotated locations for XP_006434933.1

    UniProtKB/TrEMBL
    V4T4U1
    Conserved Domains (1) summary
    pfam02365
    Location:17 → 118
    NAM; No apical meristem (NAM) protein

  2. XM_006434871.2 → XP_006434934.1  NAC transcription factor 29 isoform X1

    See identical proteins and their annotated locations for XP_006434934.1

    UniProtKB/TrEMBL
    V4V7V7

  3. XM_024183998.1 → XP_024039766.1  NAC transcription factor 29 isoform X1

    UniProtKB/TrEMBL
    V4V7V7

  4. XM_024183999.1 → XP_024039767.1  NAC transcription factor 29 isoform X1

    UniProtKB/TrEMBL
    V4V7V7

  5. XM_024183997.1 → XP_024039765.1  NAC transcription factor 29 isoform X1

    UniProtKB/TrEMBL
    V4V7V7

  6. XM_024184000.1 → XP_024039768.1  NAC domain-containing protein 100 isoform X3

    Conserved Domains (1) summary
    pfam02365
    Location:58 → 83
    NAM; No apical meristem (NAM) protein
Nucleotide Protein
Heading Accession and Version

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