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LOC18037974 homeobox-leucine zipper protein HOX11 [ Citrus x clementina ]

Gene ID: 18037974, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18037974
Gene description
homeobox-leucine zipper protein HOX11
Locus tag
CICLE_v10013382mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC18037974 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262139.1 (19046462..19048428)

NW_006262139.1Genomic Context describing neighboring genes Neighboring gene peroxidase A2-like Neighboring gene uncharacterized LOC18037973 Neighboring gene protein trichome birefringence Neighboring gene thioredoxin-like 3-1, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006262139 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: homeobox-leucine zipper protein HOX11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006262139.1 Reference Citrus_clementina_v1.0

    Range
    19046462..19048428
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024182076.1 → XP_024037844.1  LOW QUALITY PROTEIN: homeobox-leucine zipper protein HOX11

    UniProtKB/TrEMBL
    V4T0Z3
    Conserved Domains (3) summary
    smart00340
    Location:222 → 265
    HALZ; homeobox associated leucin zipper
    pfam00046
    Location:173 → 220
    Homeobox; Homeobox domain
    pfam04618
    Location:41 → 126
    HD-ZIP_N; HD-ZIP protein N terminus
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases