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LOC18035253 transcription factor RF2a [ Citrus x clementina ]

Gene ID: 18035253, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18035253
Gene description
transcription factor RF2a
Locus tag
CICLE_v10028062mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC18035253 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262022.1 (6922323..6926628)

NW_006262022.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC18035400 Neighboring gene putative receptor-like protein kinase At3g47110 Neighboring gene tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like Neighboring gene transfer RNA leucine (anticodon CAA)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006262022 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor RF2a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006262022.1 Reference Citrus_clementina_v1.0

    Range
    6922323..6926628
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006423452.2 → XP_006423515.1  transcription factor RF2a

    See identical proteins and their annotated locations for XP_006423515.1

    UniProtKB/TrEMBL
    V4SD70, V4UBU8
    Conserved Domains (2) summary
    cd14703
    Location:435 → 484
    bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain
    pfam05816
    Location:459 → 534
    TelA; Toxic anion resistance protein (TelA)
Nucleotide Protein
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