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LOC18033409 dehydration-responsive element-binding protein 1D [ Citrus x clementina ]

Gene ID: 18033409, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18033409
Gene description
dehydration-responsive element-binding protein 1D
Locus tag
CICLE_v10007068mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC18033409 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006261964.1 (28561985..28563210, complement)

NW_006261964.1Genomic Context describing neighboring genes Neighboring gene ataxin-10 Neighboring gene post-GPI attachment to proteins factor 3 Neighboring gene ethylene-responsive transcription factor ERF027 Neighboring gene traB domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006261964 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dehydration-responsive element-binding protein 1D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006261964.1 Reference Citrus_clementina_v1.0

    Range
    28561985..28563210 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006421783.2 → XP_006421846.1  dehydration-responsive element-binding protein 1D

    See identical proteins and their annotated locations for XP_006421846.1

    UniProtKB/TrEMBL
    V4SDL3
    Conserved Domains (1) summary
    cd00018
    Location:47 → 105
    AP2; DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor ...
Nucleotide Protein
Heading Accession and Version

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