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LOC18033163 transcription factor bHLH62 [ Citrus x clementina ]

Gene ID: 18033163, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18033163
Gene description
transcription factor bHLH62
Locus tag
CICLE_v10004862mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC18033163 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006261964.1 (17680507..17683079)

NW_006261964.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene kinesin-like protein KIN-12B Neighboring gene uncharacterized LOC112097050 Neighboring gene DNA topoisomerase 3-beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006261964 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor bHLH62

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006261964.1 Reference Citrus_clementina_v1.0

    Range
    17680507..17683079
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006420990.2 → XP_006421053.1  transcription factor bHLH62

    See identical proteins and their annotated locations for XP_006421053.1

    UniProtKB/TrEMBL
    V4RJN5
    Conserved Domains (1) summary
    smart00353
    Location:294 → 343
    HLH; helix loop helix domain
Nucleotide Protein
Heading Accession and Version

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