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LOC18030568 zinc-finger homeodomain protein 2 [ Eutrema salsugineum ]

Gene ID: 18030568, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18030568
Gene description
zinc-finger homeodomain protein 2
Locus tag
EUTSA_v10026163mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Eutrema salsugineum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Genomic context

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See LOC18030568 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256909.1 (6555327..6556556)

NW_006256909.1Genomic Context describing neighboring genes Neighboring gene protein MODIFIER OF SNC1 1 Neighboring gene tryptophan aminotransferase-related protein 2 Neighboring gene F-box/kelch-repeat protein SKIP6 Neighboring gene uncharacterized LOC18030570

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006256909 Unplaced Scaffold Reference Eutsalg1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of developmental process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc-finger homeodomain protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eutsalg1_0

Genomic

  1. NW_006256909.1 Reference Eutsalg1_0

    Range
    6555327..6556556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006413339.2 → XP_006413402.1  zinc-finger homeodomain protein 2

    See identical proteins and their annotated locations for XP_006413402.1

    UniProtKB/TrEMBL
    V4LVY8
    Conserved Domains (2) summary
    TIGR01565
    Location:165 → 220
    homeo_ZF_HD; homeobox domain, ZF-HD class
    pfam04770
    Location:50 → 103
    ZF-HD_dimer; ZF-HD protein dimerization region
Nucleotide Protein
Heading Accession and Version

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