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LOC18025422 myb family transcription factor PHL4 [ Eutrema salsugineum ]

Gene ID: 18025422, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18025422
Gene description
myb family transcription factor PHL4
Locus tag
EUTSA_v10002005mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Eutrema salsugineum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Genomic context

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See LOC18025422 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256895.1 (10651951..10654845)

NW_006256895.1Genomic Context describing neighboring genes Neighboring gene xyloglucan galactosyltransferase MUR3 Neighboring gene uncharacterized LOC18025421 Neighboring gene uncharacterized LOC18025423 Neighboring gene succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006256895 Unplaced Scaffold Reference Eutsalg1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myb family transcription factor PHL4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eutsalg1_0

Genomic

  1. NW_006256895.1 Reference Eutsalg1_0

    Range
    10651951..10654845
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006408895.2 → XP_006408958.1  myb family transcription factor PHL4 isoform X1

    See identical proteins and their annotated locations for XP_006408958.1

    UniProtKB/TrEMBL
    V4NUG8
    Conserved Domains (2) summary
    TIGR01557
    Location:234 → 288
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    pfam14379
    Location:318 → 362
    Myb_CC_LHEQLE; MYB-CC type transfactor, LHEQLE motif

  2. XM_024160265.1 → XP_024016033.1  myb family transcription factor PHL4 isoform X2

    Conserved Domains (2) summary
    TIGR01557
    Location:234 → 288
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    pfam14379
    Location:317 → 361
    Myb_CC_LHEQLE; MYB-CC type transfactor, LHEQLE motif
Nucleotide Protein
Heading Accession and Version

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