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LOC18024333 myb family transcription factor PHL13 [ Eutrema salsugineum ]

Gene ID: 18024333, updated on 21-Dec-2023

Summary

Gene symbol
LOC18024333
Gene description
myb family transcription factor PHL13
Locus tag
EUTSA_v10020942mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Eutrema salsugineum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Genomic context

See LOC18024333 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256885.1 (8221585..8224929, complement)

NW_006256885.1Genomic Context describing neighboring genes Neighboring gene exportin-4 Neighboring gene diphthine--ammonia ligase Neighboring gene peroxisome biogenesis protein 12 Neighboring gene 60S ribosomal protein L23 Neighboring gene histone-lysine N-methyltransferase SUVR4

Genomic regions, transcripts, and products

Genomic Sequence:
NW_006256885 Unplaced Scaffold Reference Eutsalg1_0

General protein information

Preferred Names
myb family transcription factor PHL13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eutsalg1_0

Genomic

  1. NW_006256885.1 Reference Eutsalg1_0

    Range
    8221585..8224929 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006408124.2XP_006408187.1  myb family transcription factor PHL13 isoform X3

    See identical proteins and their annotated locations for XP_006408187.1

    UniProtKB/TrEMBL
    V4NSJ6
    Conserved Domains (2) summary
    TIGR01557
    Location:179233
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    pfam14379
    Location:267308
    Myb_CC_LHEQLE; MYB-CC type transfactor, LHEQLE motif
  2. XM_024159110.1XP_024014878.1  myb family transcription factor PHL13 isoform X1

    Conserved Domains (3) summary
    TIGR01557
    Location:217271
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    pfam14379
    Location:305346
    Myb_CC_LHEQLE; MYB-CC type transfactor, LHEQLE motif
    cl26921
    Location:124296
    TraI; DNA helicase TraI
  3. XM_006408125.2XP_006408188.1  myb family transcription factor PHL13 isoform X3

    See identical proteins and their annotated locations for XP_006408188.1

    UniProtKB/TrEMBL
    V4NSJ6
    Conserved Domains (2) summary
    TIGR01557
    Location:179233
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    pfam14379
    Location:267308
    Myb_CC_LHEQLE; MYB-CC type transfactor, LHEQLE motif
  4. XM_024159111.1XP_024014879.1  myb family transcription factor PHL13 isoform X2

    Conserved Domains (3) summary
    TIGR01557
    Location:190244
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    pfam14379
    Location:278319
    Myb_CC_LHEQLE; MYB-CC type transfactor, LHEQLE motif
    cl26921
    Location:97269
    TraI; DNA helicase TraI