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LOC18021685 growth-regulating factor 4 [ Eutrema salsugineum ]

Gene ID: 18021685, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18021685
Gene description
growth-regulating factor 4
Locus tag
EUTSA_v10010453mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Eutrema salsugineum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Genomic context

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See LOC18021685 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256858.1 (1332541..1335325)

NW_006256858.1Genomic Context describing neighboring genes Neighboring gene fructose-bisphosphate aldolase 8, cytosolic Neighboring gene probable DNA double-strand break repair Rad50 ATPase Neighboring gene putative pre-16S rRNA nuclease Neighboring gene uncharacterized LOC18021687 Neighboring gene serine/threonine-protein kinase KIPK1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006256858 Unplaced Scaffold Reference Eutsalg1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in developmental process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
growth-regulating factor 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eutsalg1_0

Genomic

  1. NW_006256858.1 Reference Eutsalg1_0

    Range
    1332541..1335325
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006403690.2 → XP_006403753.1  growth-regulating factor 4

    See identical proteins and their annotated locations for XP_006403753.1

    UniProtKB/TrEMBL
    V4NGD9
    Conserved Domains (2) summary
    pfam08879
    Location:147 → 188
    WRC; WRC
    pfam08880
    Location:78 → 111
    QLQ; QLQ
Nucleotide Protein
Heading Accession and Version

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