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LOC18017558 myb-related protein 1 [ Eutrema salsugineum ]

Gene ID: 18017558, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18017558
Gene description
myb-related protein 1
Locus tag
EUTSA_v10013729mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Eutrema salsugineum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Genomic context

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See LOC18017558 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256829.1 (6198513..6200719, complement)

NW_006256829.1Genomic Context describing neighboring genes Neighboring gene glucan endo-1,3-beta-glucosidase 8 Neighboring gene general negative regulator of transcription subunit 3 Neighboring gene uncharacterized LOC18018786 Neighboring gene uncharacterized LOC112086828

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006256829 Unplaced Scaffold Reference Eutsalg1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myb-related protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eutsalg1_0

Genomic

  1. NW_006256829.1 Reference Eutsalg1_0

    Range
    6198513..6200719 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024156760.1 → XP_024012528.1  myb-related protein 1 isoform X3

    Conserved Domains (2) summary
    TIGR01557
    Location:45 → 101
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    pfam14379
    Location:145 → 184
    Myb_CC_LHEQLE; MYB-CC type transfactor, LHEQLE motif

  2. XM_024156759.1 → XP_024012527.1  myb-related protein 1 isoform X2

    Conserved Domains (2) summary
    TIGR01557
    Location:45 → 101
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    pfam14379
    Location:145 → 188
    Myb_CC_LHEQLE; MYB-CC type transfactor, LHEQLE motif

  3. XM_006400309.2 → XP_006400372.1  myb-related protein 1 isoform X1

    See identical proteins and their annotated locations for XP_006400372.1

    UniProtKB/TrEMBL
    V4KV26
    Conserved Domains (2) summary
    TIGR01557
    Location:45 → 101
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    pfam14379
    Location:145 → 190
    Myb_CC_LHEQLE; MYB-CC type transfactor, LHEQLE motif

  4. XM_024156758.1 → XP_024012526.1  myb-related protein 1 isoform X1

    UniProtKB/TrEMBL
    V4KV26
    Conserved Domains (2) summary
    TIGR01557
    Location:45 → 101
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    pfam14379
    Location:145 → 190
    Myb_CC_LHEQLE; MYB-CC type transfactor, LHEQLE motif

  5. XM_024156757.1 → XP_024012525.1  myb-related protein 1 isoform X1

    UniProtKB/TrEMBL
    V4KV26
    Conserved Domains (2) summary
    TIGR01557
    Location:45 → 101
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    pfam14379
    Location:145 → 190
    Myb_CC_LHEQLE; MYB-CC type transfactor, LHEQLE motif
Nucleotide Protein
Heading Accession and Version

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