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LOC18014046 zinc finger protein ZAT8 [ Eutrema salsugineum ]

Gene ID: 18014046, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18014046
Gene description
zinc finger protein ZAT8
Locus tag
EUTSA_v10002947mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Eutrema salsugineum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Genomic context

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See LOC18014046 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256686.1 (9293410..9294006)

NW_006256686.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112084667 Neighboring gene zinc finger protein ZAT8 Neighboring gene ras-related protein RABE1c Neighboring gene 40S ribosomal protein S15a-1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006256686 Unplaced Scaffold Reference Eutsalg1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in response to chitin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein ZAT8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eutsalg1_0

Genomic

  1. NW_006256686.1 Reference Eutsalg1_0

    Range
    9293410..9294006
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006418907.1 → XP_006418970.1  zinc finger protein ZAT8

    See identical proteins and their annotated locations for XP_006418970.1

    UniProtKB/TrEMBL
    V4MY15
    Conserved Domains (1) summary
    pfam13912
    Location:54 → 81
    zf-C2H2_6; C2H2-type zinc finger
Nucleotide Protein
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