U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC18012241 transcription factor HHO1 [ Eutrema salsugineum ]

Gene ID: 18012241, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC18012241
Gene description
transcription factor HHO1
Locus tag
EUTSA_v10004475mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Eutrema salsugineum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC18012241 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256547.1 (6640230..6641901, complement)

NW_006256547.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC18012759 Neighboring gene serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A Neighboring gene glutathione S-transferase T3-like Neighboring gene allene oxide cyclase 3, chloroplastic

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006256547 Unplaced Scaffold Reference Eutsalg1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transcription factor HHO1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eutsalg1_0

Genomic

  1. NW_006256547.1 Reference Eutsalg1_0

    Range
    6640230..6641901 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006395563.2 → XP_006395625.1  transcription factor HHO1

    See identical proteins and their annotated locations for XP_006395625.1

    UniProtKB/TrEMBL
    V4MMY5
    Conserved Domains (1) summary
    TIGR01557
    Location:210 → 262
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases