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LOC18011886 transcription factor PIF7 [ Eutrema salsugineum ]

Gene ID: 18011886, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18011886
Gene description
transcription factor PIF7
Locus tag
EUTSA_v10004458mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Eutrema salsugineum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256547.1 (2532644..2534714)

NW_006256547.1Genomic Context describing neighboring genes Neighboring gene myb-like protein AA Neighboring gene flavin-containing monooxygenase FMO GS-OX-like 8 Neighboring gene uncharacterized LOC18011754 Neighboring gene nucleolar and coiled-body phosphoprotein 1 Neighboring gene heparanase-like protein 2 Neighboring gene probable leucine-rich repeat receptor-like protein kinase At1g35710 Neighboring gene phytochrome-interacting ankyrin-repeat protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006256547 Unplaced Scaffold Reference Eutsalg1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor PIF7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eutsalg1_0

Genomic

  1. NW_006256547.1 Reference Eutsalg1_0

    Range
    2532644..2534714
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006394460.2 → XP_006394522.1  transcription factor PIF7

    See identical proteins and their annotated locations for XP_006394522.1

    UniProtKB/TrEMBL
    V4KWR3
    Conserved Domains (1) summary
    smart00353
    Location:171 → 219
    HLH; helix loop helix domain
Nucleotide Protein
Heading Accession and Version

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