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LOC17893751 DNA-binding protein S1FA3 [ Capsella rubella ]

Gene ID: 17893751, updated on 21-Dec-2023

Summary

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Gene symbol
LOC17893751
Gene description
DNA-binding protein S1FA3
Locus tag
CARUB_v10015035mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsella rubella
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Genomic context

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See LOC17893751 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Caprub1_0 (GCF_000375325.1) Unplaced Scaffold NW_006238921.1 (3014353..3015542, complement)

NW_006238921.1Genomic Context describing neighboring genes Neighboring gene DEAD-box ATP-dependent RNA helicase 57 Neighboring gene uncharacterized LOC17893053 Neighboring gene syntaxin-71 Neighboring gene uncharacterized LOC17892327

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006238921 Unplaced Scaffold Reference Caprub1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-binding protein S1FA3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsella rubella Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caprub1_0

Genomic

  1. NW_006238921.1 Reference Caprub1_0

    Range
    3014353..3015542 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006298852.2 → XP_006298914.1  DNA-binding protein S1FA3

    See identical proteins and their annotated locations for XP_006298914.1

    UniProtKB/TrEMBL
    R0G851
    Conserved Domains (1) summary
    pfam04689
    Location:8 → 73
    S1FA; DNA binding protein S1FA
Nucleotide Protein
Heading Accession and Version

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