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LOC17887044 agamous-like MADS-box protein AGL97 [ Capsella rubella ]

Gene ID: 17887044, updated on 21-Dec-2023

Summary

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Gene symbol
LOC17887044
Gene description
agamous-like MADS-box protein AGL97
Locus tag
CARUB_v10019521mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsella rubella
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Genomic context

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See LOC17887044 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Caprub1_0 (GCF_000375325.1) Unplaced Scaffold NW_006238919.1 (5731882..5732760)

NW_006238919.1Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase U27 Neighboring gene calmodulin-7 Neighboring gene uncharacterized LOC17886976 Neighboring gene endoglucanase 16

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006238919 Unplaced Scaffold Reference Caprub1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: agamous-like MADS-box protein AGL97

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsella rubella Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caprub1_0

Genomic

  1. NW_006238919.1 Reference Caprub1_0

    Range
    5731882..5732760
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023783112.1 → XP_023638880.1  LOW QUALITY PROTEIN: agamous-like MADS-box protein AGL97

    UniProtKB/TrEMBL
    R0H9P9
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases