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LOC17885890 trihelix transcription factor ASIL1 [ Capsella rubella ]

Gene ID: 17885890, updated on 21-Dec-2023

Summary

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Gene symbol
LOC17885890
Gene description
trihelix transcription factor ASIL1
Locus tag
CARUB_v10019255mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsella rubella
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Genomic context

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See LOC17885890 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Caprub1_0 (GCF_000375325.1) Unplaced Scaffold NW_006238919.1 (10295379..10296775, complement)

NW_006238919.1Genomic Context describing neighboring genes Neighboring gene protein NCA1 Neighboring gene SAC3 family protein C Neighboring gene NAC domain-containing protein 96 Neighboring gene NAC domain-containing protein 96

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006238919 Unplaced Scaffold Reference Caprub1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trihelix transcription factor ASIL1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsella rubella Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caprub1_0

Genomic

  1. NW_006238919.1 Reference Caprub1_0

    Range
    10295379..10296775 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006292917.2 → XP_006292979.1  trihelix transcription factor ASIL1

    See identical proteins and their annotated locations for XP_006292979.1

    UniProtKB/TrEMBL
    R0FSP9
    Conserved Domains (1) summary
    pfam13837
    Location:36 → 119
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
Nucleotide Protein
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Gene LinkOut

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