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LOC17885161 NAC domain-containing protein 60 [ Capsella rubella ]

Gene ID: 17885161, updated on 21-Dec-2023

Summary

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Gene symbol
LOC17885161
Gene description
NAC domain-containing protein 60
Locus tag
CARUB_v10019187mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsella rubella
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Genomic context

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See LOC17885161 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Caprub1_0 (GCF_000375325.1) Unplaced Scaffold NW_006238919.1 (5928317..5930981, complement)

NW_006238919.1Genomic Context describing neighboring genes Neighboring gene probable CCR4-associated factor 1 homolog 9 Neighboring gene uncharacterized LOC17886798 Neighboring gene nitrilase 2 Neighboring gene nitrilase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006238919 Unplaced Scaffold Reference Caprub1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NAC domain-containing protein 60

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsella rubella Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caprub1_0

Genomic

  1. NW_006238919.1 Reference Caprub1_0

    Range
    5928317..5930981 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006292858.2 → XP_006292920.1  NAC domain-containing protein 60 isoform X2

    See identical proteins and their annotated locations for XP_006292920.1

    UniProtKB/TrEMBL
    R0HPC6
    Conserved Domains (1) summary
    pfam02365
    Location:16 → 57
    NAM; No apical meristem (NAM) protein

  2. XM_023782835.1 → XP_023638603.1  NAC domain-containing protein 60 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases