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LOC17874922 ribonuclease J [ Capsella rubella ]

Gene ID: 17874922, updated on 3-Jun-2019

Summary

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Gene symbol
LOC17874922
Gene description
ribonuclease J
Locus tag
CARUB_v10027519mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsella rubella
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Genomic context

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See LOC17874922 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Caprub1_0 (GCF_000375325.1) Unplaced Scaffold NW_006238916.1 (11702659..11708391)

NW_006238916.1Genomic Context describing neighboring genes Neighboring gene adenylate kinase 4 Neighboring gene probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 Neighboring gene UPF0235 protein At5g63440 Neighboring gene cytochrome P450 94B1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006238916 Unplaced Scaffold Reference Caprub1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC17874922

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsella rubella Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caprub1_0

Genomic

  1. NW_006238916.1 Reference Caprub1_0

    Range
    11702659..11708391
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006279669.2 → XP_006279731.1  uncharacterized protein LOC17874922

    See identical proteins and their annotated locations for XP_006279731.1

    UniProtKB/TrEMBL
    R0G7Y9
    Conserved Domains (3) summary
    cd12203
    Location:816 → 881
    GT1; GT1, myb-like, SANT family
    COG0595
    Location:100 → 656
    RnjA; mRNA degradation ribonuclease J1/J2 [Translation, ribosomal structure and biogenesis]
    cd07714
    Location:110 → 521
    RNaseJ_MBL-fold; RNAaseJ, MBL-fold metallo-hydrolase domain
Nucleotide Protein
Heading Accession and Version

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