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lpd-5 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [ Caenorhabditis elegans ]

Gene ID: 172037, updated on 18-Sep-2024

Summary

Official Symbol
lpd-5
Official Full Name
NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
Primary source
WormBase:WBGene00003061
Locus tag
CELE_ZK973.10
See related
AllianceGenome:WB:WBGene00003061
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable oxidoreductase activity, acting on NAD(P)H. Involved in lipid storage. Predicted to be located in mitochondrial inner membrane and respirasome. Predicted to be part of mitochondrial respiratory chain complex I. Human ortholog(s) of this gene implicated in Leigh disease and nuclear type mitochondrial complex I deficiency 1. Orthologous to human NDUFS4 (NADH:ubiquinone oxidoreductase subunit S4). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See lpd-5 in Genome Data Viewer
Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_003279.8 (4372255..4373018, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene BTB domain-containing protein Neighboring gene PPM-type phosphatase domain-containing protein Neighboring gene SS18 N-terminal domain-containing protein Neighboring gene Chromo domain-containing protein Neighboring gene Thioredoxin domain-containing protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in electron transport chain IEA
Inferred from Electronic Annotation
more info
 
involved_in lipid storage IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in mitochondrial electron transport, NADH to ubiquinone IC
Inferred by Curator
more info
 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 
part_of respiratory chain complex IEA
Inferred from Electronic Annotation
more info
 
part_of respiratory chain complex I IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of respiratory chain complex I ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
NP_001370829.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    4372255..4373018 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001382913.2NP_001370829.1  NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9N4L8
    Conserved Domains (1) summary
    pfam04800
    Location:75171
    ETC_C1_NDUFA4; ETC complex I subunit conserved region