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Il17rd interleukin 17 receptor D [ Mus musculus (house mouse) ]

Gene ID: 171463, updated on 2-Nov-2024

Summary

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Official Symbol
Il17rdprovided by MGI
Official Full Name
interleukin 17 receptor Dprovided by MGI
Primary source
MGI:MGI:2159727
See related
Ensembl:ENSMUSG00000040717 AllianceGenome:MGI:2159727
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Sef; mSef; Sef-S; IL-17RD; 2810004A10Rik
Summary
Predicted to enable interleukin-17 receptor activity. Involved in negative regulation of epithelial to mesenchymal transition and negative regulation of transforming growth factor beta receptor signaling pathway. Predicted to be located in Golgi apparatus and nucleoplasm. Is expressed in several structures, including alimentary system; brain; branchial arch; extraembryonic component; and sensory organ. Human ortholog(s) of this gene implicated in hypogonadotropic hypogonadism 18 with or without anosmia. Orthologous to human IL17RD (interleukin 17 receptor D). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Broad expression in limb E14.5 (RPKM 5.6), lung adult (RPKM 4.4) and 23 other tissues See more
Orthologs
human all
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Genomic context

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See Il17rd in Genome Data Viewer
Location:
14 A3; 14 16.09 cM
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (26760990..26829243)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (27038964..27107286)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 Neighboring gene STARR-seq mESC enhancer starr_36250 Neighboring gene STARR-seq mESC enhancer starr_36251 Neighboring gene predicted gene, 41114 Neighboring gene STARR-positive B cell enhancer mm9_chr14:27843023-27843323 Neighboring gene STARR-seq mESC enhancer starr_36253 Neighboring gene homeobox gene expressed in ES cells Neighboring gene STARR-seq mESC enhancer starr_36262 Neighboring gene STARR-seq mESC enhancer starr_36263 Neighboring gene Rho guanine nucleotide exchange factor 3 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:28044030-28044193 Neighboring gene predicted gene 7591 Neighboring gene predicted gene, 34848

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Endothelial IL17RD promotes Western diet-induced aortic myeloid cell infiltration. Pande S, et al. Biochem Biophys Res Commun, 2024 Mar 15. PMID 38335918,
  2. Sef is a negative regulator of fiber cell differentiation in the ocular lens. Newitt P, et al. Differentiation, 2010 Jul. PMID 20542628, Free PMC Article
  3. IL-17RD/sef exacerbates experimental mouse colitis and inflammation-associated tumorigenesis by regulating the proportion of T cell subsets. Fu Y, et al. FEBS Lett, 2022 Feb. PMID 34939667
  4. Loss of interleukin-17 receptor D promotes chronic inflammation-associated tumorigenesis. Girondel C, et al. Oncogene, 2021 Jan. PMID 33177649
  5. Deficiency of Sef is associated with increased postnatal cortical bone mass by regulating Runx2 activity. He Q, et al. J Bone Miner Res, 2014. PMID 24127237, Free PMC Article

See all (57) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Endothelial IL17RD promotes Western diet-induced aortic myeloid cell infiltration.
    Title: Endothelial IL17RD promotes Western diet-induced aortic myeloid cell infiltration.
  2. A shedding soluble form of interleukin-17 receptor D exacerbates collagen-induced arthritis through facilitating TNF-alpha-dependent receptor clustering.
    Title: A shedding soluble form of interleukin-17 receptor D exacerbates collagen-induced arthritis through facilitating TNF-α-dependent receptor clustering.
  3. IL-17RD/sef exacerbates experimental mouse colitis and inflammation-associated tumorigenesis by regulating the proportion of T cell subsets.
    Title: IL-17RD/sef exacerbates experimental mouse colitis and inflammation-associated tumorigenesis by regulating the proportion of T cell subsets.
  4. Loss of interleukin-17 receptor D promotes chronic inflammation-associated tumorigenesis.
    Title: Loss of interleukin-17 receptor D promotes chronic inflammation-associated tumorigenesis.
  5. Deficiency of IL-17RD expression in cells leads to enhanced pro-inflammatory signalling and gene expression in response to TLR stimulation, and Il17rd(-/-) mice are more susceptible to TLR-induced septic shock.
    Title: Orphan receptor IL-17RD regulates Toll-like receptor signalling via SEFIR/TIR interactions.
  6. Demonstrate SEF expression in a healthy ovary during folliculogenesis and suggest hormonal regulation of its expression may be an important factor involved in intra-ovarian control mechanisms.
    Title: Expression and regulation of the tumor suppressor, SEF, during folliculogenesis in humans and mice.
  7. these studies indicate that Sef has specific roles in osteoblast and osteoclast lineages and that its absence results in increased osteoblast and osteoclast activity with a net increase in cortical bone mass.
    Title: Deficiency of Sef is associated with increased postnatal cortical bone mass by regulating Runx2 activity.
  8. Orphan receptor IL-17RD tunes IL-17A signalling and is required for neutrophilia.
    Title: Orphan receptor IL-17RD tunes IL-17A signalling and is required for neutrophilia.
  9. Since expression of IL-17 is elevated in 3-month-old MRL/lpr mice, we suggest that it plays a role in the pathophysiology of autoimmune dacryoadenitis in these mice.
    Title: Expression of interleukin-17 in autoimmune dacryoadenitis in MRL/lpr mice.
  10. Over-expressing Sef specifically in the lens of transgenic mice led to impaired lens and eye development that resulted in microphthalmia.
    Title: Sef is a negative regulator of fiber cell differentiation in the ocular lens.
Submit: New GeneRIF Correction See all GeneRIFs (18)

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Clone Names

  • MGC118454

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables interleukin-17 receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables interleukin-17 receptor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in cytokine-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
  
involved_in negative regulation of epithelial to mesenchymal transition IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in negative regulation of transforming growth factor beta receptor signaling pathway IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus ISO
Inferred from Sequence Orthology
more info
  
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
interleukin-17 receptor D
Names
IL-17 receptor D
interleukin-17 receptor-like protein
sef homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001411765.1 → NP_001398694.1  interleukin-17 receptor D isoform 2 precursor

    Status: VALIDATED

    Source sequence(s)
    AC124603, AC125152

  2. NM_134437.4 → NP_602319.1  interleukin-17 receptor D isoform 1 precursor

    See identical proteins and their annotated locations for NP_602319.1

    Status: VALIDATED

    Source sequence(s)
    AC124603, AC125152
    Consensus CDS
    CCDS26885.1
    UniProtKB/Swiss-Prot
    B2RRY7, Q8JZL1, Q8K447, Q8R5J8
    Related
    ENSMUSP00000036076.4, ENSMUST00000035336.5
    Conserved Domains (2) summary
    pfam08357
    Location:356 → 511
    SEFIR; SEFIR domain
    pfam16742
    Location:48 → 169
    IL17R_D_N; N-terminus of interleukin 17 receptor D

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    26760990..26829243
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006518668.2 → XP_006518731.1  interleukin-17 receptor D isoform X2

    UniProtKB/TrEMBL
    Q3V0D5
    Related
    ENSMUSP00000153543.2, ENSMUST00000225146.2
    Conserved Domains (2) summary
    pfam08357
    Location:212 → 367
    SEFIR; SEFIR domain
    pfam16742
    Location:1 → 25
    IL17R_D_N; N-terminus of interleukin 17 receptor D

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_027265.1: Suppressed sequence

    Description
    NM_027265.1: This RefSeq was permanently suppressed because it is primarily UTR sequence.
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8JZL1.1 GenPept UniProtKB/Swiss-Prot:Q8JZL1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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