U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

COCSUDRAFT_61601 hypothetical protein [ Coccomyxa subellipsoidea C-169 ]

Gene ID: 17043384, updated on 28-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
COCSUDRAFT_61601
Gene description
hypothetical protein
Locus tag
COCSUDRAFT_61601
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Coccomyxa subellipsoidea C-169 (strain: C-169)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Exon count:
10

NW_005178039.1Genomic Context describing neighboring genes Neighboring gene kinase-like protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene cation-transporting ATPase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005178039.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation. Blanc G, et al. Genome Biol, 2012 May 25. PMID 22630137, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded telomeric DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_005178039.1 Reference assembly

    Range
    2026124..2029452
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005649869.1 → XP_005649926.1  hypothetical protein COCSUDRAFT_61601 [Coccomyxa subellipsoidea C-169]

    See identical proteins and their annotated locations for XP_005649926.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    I0Z413
    Conserved Domains (3) summary
    smart00526
    Location:211 → 277
    H15; Domain in histone families 1 and 5
    smart00717
    Location:11 → 62
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    cd11660
    Location:12 → 63
    SANT_TRF; Telomere repeat binding factor-like DNA-binding domains of the SANT/myb-like family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases