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COCSUDRAFT_42839 CG-1-domain-containing protein [ Coccomyxa subellipsoidea C-169 ]

Gene ID: 17039778, updated on 28-Dec-2023

Summary

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Gene symbol
COCSUDRAFT_42839
Gene description
CG-1-domain-containing protein
Locus tag
COCSUDRAFT_42839
Gene type
protein coding
RNA name
CG-1-domain-containing protein
RefSeq status
PROVISIONAL
Organism
Coccomyxa subellipsoidea C-169 (strain: C-169)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa
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Genomic context

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Exon count:
6

NW_005178032.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 2C catalytic subunit Neighboring gene GBP-domain-containing protein Neighboring gene RabGAP/TBC Neighboring gene solute carrier protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005178032.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation. Blanc G, et al. Genome Biol, 2012 May 25. PMID 22630137, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
CG-1-domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_005178032.1 Reference assembly

    Range
    396420..398796
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005646280.1 → XP_005646337.1  CG-1-domain-containing protein [Coccomyxa subellipsoidea C-169]

    See identical proteins and their annotated locations for XP_005646337.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    I0YTS4
    Conserved Domains (1) summary
    pfam03859
    Location:32 → 143
    CG-1; CG-1 domain
Nucleotide Protein
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