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CITED4 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 [ Homo sapiens (human) ]

Gene ID: 163732, updated on 2-Nov-2024

Summary

Official Symbol
CITED4provided by HGNC
Official Full Name
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4provided by HGNC
Primary source
HGNC:HGNC:18696
See related
Ensembl:ENSG00000179862 MIM:606815; AllianceGenome:HGNC:18696
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
The protein encoded by this intronless gene belongs to the CITED family of transcriptional coactivators that bind to several proteins, including CREB-binding protein (CBP) and p300, via a conserved 32 aa C-terminal motif, and regulate gene transcription. This protein also interacts with transcription factor AP2 (TFAP2), and thus may function as a co-activator for TFAP2. Hypermethylation and transcriptional downregulation of this gene has been observed in oligodendroglial tumors with deletions of chromosomal arms 1p and 19q, and associated with longer recurrence-free and overall survival of patients with oligodendroglial tumors. [provided by RefSeq, Aug 2011]
Orthologs
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Genomic context

See CITED4 in Genome Data Viewer
Location:
1p34.2; 1p35-p34
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (40861054..40862363, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (40730294..40731603, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (41326726..41328035, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel subfamily Q member 4 Neighboring gene RNA, 7SL, cytoplasmic 326, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:41279047-41279546 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 855 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 735 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:41286429-41286930 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:41290219-41291122 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:41300271-41300796 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:41305349-41305957 Neighboring gene uncharacterized LOC105378676 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 856 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 736 Neighboring gene uncharacterized LOC124904157 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 737 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 857 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:41330845-41331394 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:41331395-41331944 Neighboring gene Sharpr-MPRA regulatory region 4660 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr1:41340995-41342194 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:41347079-41347578 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:41349491-41349992 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr1:41363720-41364919 Neighboring gene Sharpr-MPRA regulatory region 1319 Neighboring gene protein phosphatase 2 catalytic subunit alpha pseudogene

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables transcription coactivator activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables transcription coactivator activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 
involved_in response to estrogen ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nucleoplasm TAS
Traceable Author Statement
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
cbp/p300-interacting transactivator 4
Names
MRG-2
MSG1-related protein 2
transcriptional co-activator 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_133467.3NP_597724.1  cbp/p300-interacting transactivator 4

    See identical proteins and their annotated locations for NP_597724.1

    Status: VALIDATED

    Source sequence(s)
    AC119677, BC052559
    Consensus CDS
    CCDS458.1
    UniProtKB/Swiss-Prot
    Q96RK1
    Related
    ENSP00000361721.2, ENST00000372638.4
    Conserved Domains (1) summary
    pfam04487
    Location:1184
    CITED; CITED

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    40861054..40862363 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    40730294..40731603 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)