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HTLV2gp6 hypothetical protein [ Human T-lymphotropic virus 2 ]

Gene ID: 1491942, updated on 18-Aug-2023

Summary

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Gene symbol
HTLV2gp6
Gene description
hypothetical protein
Locus tag
HTLV2gp6
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Human T-lymphotropic virus 2
Lineage
Viruses; Retro-transcribing viruses; Retroviridae; Orthoretrovirinae; Deltaretrovirus
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Genomic context

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Sequence:
NC_001488.1 (5180..6640)

NC_001488.1Genomic Context describing neighboring genes Neighboring gene pol polyprotein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001488.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence of the envelope glycoprotein gene of type II human T lymphotropic virus. Sodroski J, et al. Science, 1984 Jul 27. PMID 6204380
  2. Complete nucleotide sequence of an infectious clone of human T-cell leukemia virus type II: an open reading frame for the protease gene. Shimotohno K, et al. Proc Natl Acad Sci U S A, 1985 May. PMID 2582407, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

variation

  • Loc: 6229 replace = g

General protein information

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Preferred Names
hypothetical protein
Names
p21E envelope protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001488.1 Reference assembly

    Range
    5180..6640
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_041006.1 env propeptide, (putative; first expressed exon); putative [Human T-lymphotropic virus 2]

    See identical proteins and their annotated locations for NP_041006.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P03382, P03383
    UniProtKB/TrEMBL
    A0A455S9W1, Q905D5
    Conserved Domains (2) summary
    cd09851
    Location:345 → 412
    HTLV-1-like_HR1-HR2; heptad repeat 1-heptad repeat 2 region (ectodomain) of the transmembrane subunit of human T-cell leukemia virus type 1 (HTLV-1), and related domains
    pfam00429
    Location:13 → 468
    TLV_coat; ENV polyprotein (coat polyprotein)

  2. NP_954569.1 p21E envelope protein

    UniProtKB/TrEMBL
    Q90VD4, Q9WBI2
    Conserved Domains (1) summary
    cd09851
    Location:37 → 104
    HTLV-1-like_HR1-HR2; heptad repeat 1-heptad repeat 2 region (ectodomain) of the transmembrane subunit of human T-cell leukemia virus type 1 (HTLV-1), and related domains
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P03383.1

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