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CAOG_01179 sphingomyelin phosphodiesterase [ Capsaspora owczarzaki ATCC 30864 ]

Gene ID: 14902886, updated on 9-Nov-2023

Summary

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Gene symbol
CAOG_01179
Gene description
sphingomyelin phosphodiesterase
Locus tag
CAOG_01179
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Capsaspora owczarzaki ATCC 30864 (strain: ATCC 30864, nat-host: pulmonate snail, culture-collection: ATCC:30864)
Lineage
Eukaryota; Filasterea; Capsaspora
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Genomic context

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Location:
chromosome: Unknown
Exon count:
5

NW_011887292.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene lariat debranching enzyme Neighboring gene hypothetical protein Neighboring gene importin alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011887292.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acid sphingomyelin phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingomyelin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingomyelin phosphodiesterase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_011887292.1 Reference assembly

    Range
    3769624..3772759 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004365993.2 → XP_004366050.2  sphingomyelin phosphodiesterase [Capsaspora owczarzaki ATCC 30864]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D2WIP8
    Conserved Domains (3) summary
    smart00741
    Location:85 → 159
    SapB; Saposin (B) Domains
    cd00842
    Location:198 → 492
    MPP_ASMase; acid sphingomyelinase and related proteins, metallophosphatase domain
    pfam00149
    Location:241 → 457
    Metallophos; Calcineurin-like phosphoesterase
Protein Accession Links
GenPept Link UniProtKB Link
EFW40654.2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases