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VNG_RS11855 winged helix-turn-helix domain-containing protein [ Halobacterium salinarum NRC-1 ]

Gene ID: 1449367, updated on 22-Oct-2024

Summary

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Gene symbol
VNG_RS11855
Gene description
winged helix-turn-helix domain-containing protein
Locus tag
VNG_RS11855
Gene type
protein coding
Organism
Halobacterium salinarum NRC-1 (strain: NRC-1; ATCC 700922, culture-collection: ATCC:700922)
Lineage
Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium
Old locus tag
VNG6373G; VNG_6373G
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Genomic context

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Location:
plasmid: pNRC200
Sequence:
NC_002608.1 (299591..299851)

NC_002608.1Genomic Context describing neighboring genes Neighboring gene restriction endonuclease Neighboring gene HalOD1 output domain-containing protein Neighboring gene hypothetical protein Neighboring gene helix-turn-helix domain-containing protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002608.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A manual curation strategy to improve genome annotation: application to a set of haloarchael genomes. Pfeiffer F, et al. Life (Basel), 2015 Jun 2. PMID 26042526, Free PMC Article
  2. Evolution in the laboratory: the genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1. Pfeiffer F, et al. Genomics, 2008 Apr. PMID 18313895

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
winged helix-turn-helix domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002608.1 Reference assembly

    Range
    299591..299851
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_008526012.1 MULTISPECIES: winged helix-turn-helix domain-containing protein [Halobacteriales]

    See identical proteins and their annotated locations for WP_008526012.1

    UniProtKB/TrEMBL
    B0R9E1, F7PJM8, Q9HHI8
    Conserved Domains (1) summary
    pfam13412
    Location:14 → 56
    HTH_24; Winged helix-turn-helix DNA-binding
Nucleotide Protein
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Gene LinkOut

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