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VNG_RS06135 HAD family hydrolase [ Halobacterium salinarum NRC-1 ]

Gene ID: 1448153, updated on 31-Mar-2024

Summary

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Gene symbol
VNG_RS06135
Gene description
HAD family hydrolase
Locus tag
VNG_RS06135
Gene type
protein coding
Organism
Halobacterium salinarum NRC-1 (strain: NRC-1; ATCC 700922, culture-collection: ATCC:700922)
Lineage
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium
Old locus tag
VNG1577C; VNG_1577C
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Genomic context

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Sequence:
NC_002607.1 (1178531..1179148)

NC_002607.1Genomic Context describing neighboring genes Neighboring gene cob(I)yrinic acid a,c-diamide adenosyltransferase Neighboring gene cobyric acid synthase Neighboring gene cobalamin biosynthesis protein Neighboring gene adenosylcobinamide-GDP ribazoletransferase Neighboring gene NTP transferase domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002607.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A manual curation strategy to improve genome annotation: application to a set of haloarchael genomes. Pfeiffer F, et al. Life (Basel), 2015 Jun 2. PMID 26042526, Free PMC Article
  2. Evolution in the laboratory: the genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1. Pfeiffer F, et al. Genomics, 2008 Apr. PMID 18313895
  3. Evolutionary genomics of the HAD superfamily: understanding the structural adaptations and catalytic diversity in a superfamily of phosphoesterases and allied enzymes. Burroughs AM, et al. J Mol Biol, 2006 Sep 1. PMID 16889794

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
HAD family hydrolase
WP_049892512.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002607.1 Reference assembly

    Range
    1178531..1179148
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_049892512.1 HAD family hydrolase [Halobacterium salinarum]

    UniProtKB/TrEMBL
    A0A4D6GU02, A0A510N7A9, A0A841H8T1, B0R5X3
    Conserved Domains (1) summary
    COG1011
    Location:5 → 201
    YigB; FMN phosphatase YigB, HAD superfamily [Coenzyme transport and metabolism]
Nucleotide Protein
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